PAL2NAL output

              M   T   T   H   L   V   W   F   R   Q   D   L   R   L   H   D   N   L   A   L
PHR_ECOLI.    ATG ACT ACC CAT CTG GTC TGG TTT CGC CAG GAT TTA CGT CTG CAC GAT AAT CTC GCA CTG
              M   P   T   H   L   V   W   F   R   R   D   L   R   L   Q   D   N   L   A   L
PHR_SALTY.    ATG CCC ACC CAT TTA GTC TGG TTC AGG CGC GAT CTG CGT TTA CAG GAT AAC CTT GCG CTG

              A   A   A   C   R   N   S   S   A   R   V   L   A   L   Y   I   A   T   P   R
PHR_ECOLI.    GCT GCC GCC TGC CGC AAT TCG TCT GCA CGC GTG CTG GCG TTG TAT ATC GCT ACA CCA CGC
              A   A   A   C   R   D   A   S   A   R   V   L   A   L   Y   I   S   T   P   A
PHR_SALTY.    GCC GCC GCC TGC CGC GAT GCA TCC GCG CGG GTG CTG GCG CTT TAT ATT TCC ACC CCC GCG

              Q   W   A   T   H   N   M   S   P   R   Q   A   E   L   I   N   A   Q   L   N
PHR_ECOLI.    CAG TGG GCG ACG CAT AAC ATG TCG CCG CGT CAG GCT GAA CTT ATC AAT GCT CAA CTG AAT
              Q   W   Q   A   H   D   M   A   P   R   Q   A   A   F   I   S   A   Q   L   N
PHR_SALTY.    CAG TGG CAG GCC CAT GAT ATG GCG CCG CGG CAG GCG GCA TTC ATC AGC GCG CAG CTC AAT

              G   L   Q   I   A   L   A   E   K   G   I   P   L   L   F   R   E   V   D   D
PHR_ECOLI.    GGG CTA CAA ATA GCG CTT GCG GAA AAA GGT ATT CCT TTA TTG TTC CGT GAA GTG GAT GAC
              A   L   Q   T   A   L   A   E   K   G   I   P   L   L   F   H   E   V   A   D
PHR_SALTY.    GCG CTA CAG ACG GCC CTT GCA GAG AAA GGC ATT CCG TTG CTG TTT CAT GAA GTG GCG GAT

              F   V   A   S   V   E   I   V   K   Q   V   C   A   E   N   S   V   T   H   L
PHR_ECOLI.    TTT GTC GCC AGT GTC GAA ATA GTT AAA CAG GTG TGC GCG GAA AAC AGC GTT ACC CAC CTG
              F   N   A   S   I   E   T   V   K   N   V   C   R   Q   H   D   V   S   H   L
PHR_SALTY.    TTT AAC GCC AGT ATT GAA ACG GTC AAA AAC GTT TGC CGA CAG CAT GAC GTC AGC CAT CTG

              F   Y   N   Y   Q   Y   E   V   N   E   R   A   R   D   V   E   V   E   R   A
PHR_ECOLI.    TTT TAT AAC TAT CAG TAT GAA GTG AAT GAG CGG GCG CGG GAT GTG GAA GTT GAA AGA GCG
              F   Y   N   Y   Q   Y   E   F   N   E   R   Q   R   D   A   A   V   E   K   T
PHR_SALTY.    TTT TAT AAC TAT CAG TAT GAG TTT AAC GAG CGT CAG CGT GAT GCG GCG GTG GAA AAA ACG

              L   R   N   V   V   C   E   G   F   D   D   S   V   I   L   P   P   G   A   V
PHR_ECOLI.    CTG CGT AAC GTG GTG TGT GAA GGA TTT GAT GAC AGC GTG ATC CTG CCG CCT GGC GCG GTG
              L   P   S   V   I   C   E   G   F   D   D   S   V   I   L   A   P   G   A   V
PHR_SALTY.    CTG CCC TCT GTC ATC TGC GAA GGC TTT GAC GAT AGC GTG ATT CTG GCG CCC GGC GCG GTG

              M   T   G   N   H   E   M   Y   K   V   F   T   P   F   K   N   A   W   L   K
PHR_ECOLI.    ATG ACC GGT AAT CAC GAG ATG TAC AAA GTC TTT ACG CCT TTT AAG AAT GCC TGG CTG AAA
              M   T   G   N   H   E   M   Y   K   V   F   T   P   F   K   N   A   W   L   K
PHR_SALTY.    ATG ACC GGC AAT CAT GAA ATG TAT AAA GTT TTT ACG CCG TTT AAA AAT GCC TGG TTG AAA

              R   L   R   E   G   M   P   E   C   V   A   A   P   K   V   R   S   S   G   S
PHR_ECOLI.    CGG CTG CGG GAA GGG ATG CCG GAG TGC GTC GCT GCG CCA AAA GTT CGT AGT AGC GGA TCG
              R   L   K   E   D   I   P   P   C   V   P   A   P   K   I   R   V   S   G   A
PHR_SALTY.    CGG CTA AAA GAA GAT ATC CCG CCG TGC GTT CCG GCC CCG AAG ATC CGG GTG AGC GGC GCG

              I   E   -   P   S   P   S   I   T   L   N   Y   P   R   Q   S   F   D   T   A
PHR_ECOLI.    ATA GAG --- CCC TCG CCA TCC ATT ACG CTG AAT TAT CCT CGT CAG TCT TTC GAT ACT GCG
              L   S   T   P   L   T   P   V   S   L   N   Y   P   Q   Q   A   F   D   A   A
PHR_SALTY.    CTT TCT ACA CCC TTA ACG CCA GTC TCG CTT AAC TAC CCG CAA CAG GCG TTT GAC GCC GCG

              H   F   P   V   E   E   K   A   A   I   A   Q   L   R   Q   F   C   Q   N   G
PHR_ECOLI.    CAT TTT CCG GTG GAA GAA AAA GCG GCG ATT GCG CAA TTA CGC CAG TTT TGC CAG AAC GGT
              L   F   P   V   E   E   N   A   V   I   A   Q   L   R   Q   F   C   A   Q   G
PHR_SALTY.    CTT TTC CCG GTG GAA GAA AAC GCG GTC ATC GCG CAG CTA CGT CAG TTT TGC GCG CAG GGC

              A   G   E   Y   E   Q   Q   R   D   F   P   A   V   E   G   T   S   R   L   S
PHR_ECOLI.    GCC GGA GAA TAT GAG CAA CAA CGA GAT TTT CCG GCA GTG GAA GGC ACC AGC CGT TTG TCG
              A   D   E   Y   A   L   R   R   D   F   P   A   V   D   G   T   S   R   L   S
PHR_SALTY.    GCA GAC GAG TAT GCG TTA CGG CGC GAT TTC CCT GCG GTT GAC GGC ACC AGT CGG CTT TCC

              A   S   L   A   T   G   G   L   S   P   R   Q   C   L   H   R   L   L   A   E
PHR_ECOLI.    GCC AGC CTG GCA ACG GGC GGG TTA TCG CCT CGC CAG TGC TTG CAT CGC TTG TTG GCT GAA
              A   S   L   A   T   G   G   L   S   P   R   Q   C   L   H   R   L   L   A   E
PHR_SALTY.    GCC AGC CTG GCG ACG GGC GGC CTG TCG CCG CGA CAG TGC CTG CAC CGA TTA CTG GCG GAG

              Q   P   Q   A   L   D   G   G   A   G   S   V   W   L   N   E   L   I   W   R
PHR_ECOLI.    CAG CCG CAG GCG CTG GAC GGT GGG GCC GGT AGT GTC TGG CTT AAT GAG CTG ATC TGG CGC
              Q   P   Q   A   L   D   G   G   P   G   S   V   W   L   N   E   L   I   W   R
PHR_SALTY.    CAG CCG CAG GCG CTG GAC GGC GGG CCG GGA AGC GTC TGG TTG AAT GAG CTC ATC TGG CGG

              E   F   Y   R   H   L   I   T   Y   H   P   S   L   C   K   H   R   P   F   I
PHR_ECOLI.    GAG TTT TAC CGT CAC CTG ATA ACG TAT CAC CCC TCG TTG TGT AAA CAT CGT CCA TTT ATT
              E   F   Y   R   H   L   M   T   W   Y   P   A   L   C   K   H   Q   P   F   I
PHR_SALTY.    GAA TTT TAC CGT CAT TTA ATG ACC TGG TAT CCG GCA TTA TGC AAA CAC CAG CCG TTT ATC

              A   W   T   D   R   V   Q   W   Q   S   N   P   A   H   L   Q   A   W   Q   E
PHR_ECOLI.    GCC TGG ACG GAT CGT GTA CAG TGG CAG AGC AAT CCC GCA CAT TTA CAG GCC TGG CAG GAA
              R   W   T   K   R   V   A   W   Q   E   N   P   H   Y   F   Q   A   W   Q   K
PHR_SALTY.    CGC TGG ACA AAA CGC GTC GCG TGG CAG GAA AAC CCG CAC TAT TTT CAG GCA TGG CAG AAA

              G   K   T   G   Y   P   I   V   D   A   A   M   R   Q   L   N   S   T   G   W
PHR_ECOLI.    GGC AAA ACG GGA TAC CCG ATT GTT GAT GCC GCT ATG CGT CAG CTT AAC AGC ACT GGC TGG
              G   E   T   G   Y   P   I   V   D   A   A   M   R   Q   L   N   A   T   G   W
PHR_SALTY.    GGC GAA ACC GGT TAT CCC ATT GTC GAT GCG GCG ATG CGC CAG CTT AAC GCG ACG GGC TGG

              M   H   N   R   L   R   M   I   T   A   S   F   L   V   K   D   L   L   I   D
PHR_ECOLI.    ATG CAT AAC AGG CTA CGG ATG ATT ACA GCC AGT TTT CTG GTG AAA GAT TTA TTG ATC GAC
              M   H   N   R   L   R   M   I   T   A   S   F   L   V   K   D   L   L   I   D
PHR_SALTY.    ATG CAT AAC CGT TTA CGC ATG ATT ACC GCC AGC TTT CTG GTA AAA GAT CTG TTG ATT GAC

              W   R   E   G   E   R   Y   F   M   S   Q   L   I   D   G   D   L   A   A   N
PHR_ECOLI.    TGG CGC GAA GGC GAG CGA TAT TTC ATG TCG CAG CTG ATT GAT GGT GAT TTG GCA GCC AAT
              W   R   L   G   E   R   Y   F   M   S   Q   L   I   D   G   D   L   A   A   N
PHR_SALTY.    TGG CGG TTG GGG GAG CGC TAT TTC ATG TCG CAG CTT ATT GAC GGC GAT CTT GCC GCC AAT

              N   G   G   W   Q   W   A   A   S   T   G   T   D   A   A   P   Y   F   R   I
PHR_ECOLI.    AAC GGT GGC TGG CAG TGG GCC GCT TCA ACC GGA ACC GAT GCA GCG CCG TAT TTT CGT ATT
              N   G   G   W   Q   W   A   A   S   T   G   T   D   A   A   P   Y   F   R   I
PHR_SALTY.    AAT GGC GGC TGG CAG TGG GCC GCC TCA ACC GGT ACT GAC GCC GCG CCT TAT TTT CGT ATT

              F   N   P   T   T   Q   G   E   K   F   D   H   E   G   E   F   I   R   Q   W
PHR_ECOLI.    TTC AAC CCG ACA ACC CAG GGC GAG AAA TTT GAT CAT GAG GGC GAG TTT ATC CGC CAG TGG
              F   N   P   T   T   Q   G   E   R   F   D   R   D   G   E   F   I   R   Q   W
PHR_SALTY.    TTT AAT CCC ACG ACT CAG GGA GAG AGG TTC GAT CGC GAC GGC GAA TTT ATC CGC CAG TGG

              L   P   E   L   R   D   V   P   G   K   V   V   H   E   P   W   K   W   A   Q
PHR_ECOLI.    CTA CCG GAA CTG CGC GAT GTG CCA GGG AAA GTG GTG CAT GAG CCG TGG AAG TGG GCG CAG
              L   P   A   L   R   D   I   P   G   K   A   I   H   E   P   W   R   W   A   E
PHR_SALTY.    CTA CCG GCA TTA CGC GAT ATC CCT GGA AAA GCG ATT CAC GAG CCG TGG CGG TGG GCG GAA

              K   A   G   V   T   L   D   Y   P   Q   P   I   V   E   H   K   E   A   R   V
PHR_ECOLI.    AAA GCA GGT GTG ACG CTG GAT TAT CCG CAA CCG ATA GTC GAG CAC AAA GAA GCG AGA GTA
              K   A   G   V   V   L   D   Y   P   R   P   I   V   E   H   K   Q   A   R   I
PHR_SALTY.    AAA GCG GGA GTC GTG CTT GAT TAT CCT CGG CCT ATT GTG GAG CAC AAA CAG GCG AGA ATC

              Q   T   L   A   A   Y   E   A   A   R   K   G   K
PHR_ECOLI.    CAA ACG TTG GCA GCG TAT GAG GCG GCG CGG AAG GGG AAA
              A   T   L   S   A   Y   E   A   A   R   K   G   A
PHR_SALTY.    GCA ACG CTT TCC GCC TAT GAG GCG GCG AGA AAA GGG GCG