fretree Interactive tree rearrangement Number of species [0]: 6 Phylip tree file: offsprings.treefile PHYLIP tree output file [offsprings.treefile]: offsprings_out.treefile Reading tree file ... ,----1:B ,-------------------8 ! `--2:C ! ! ,--------------------------------3:D --7-----9 ! ! ,------------------------------------4:E ! `-10 ! `------------------------------------5:F ! `-------------------------------------------------------------------------6:A NEXT? (R . = U W O M T F D B N H J K L C + ? X Q) (? for Help): ? . Redisplay the same tree again = Redisplay the same tree without/with lengths U Undo the most recent change in the tree W Write tree to a file + Read next tree from file (may blow up if none is there) R Rearrange a tree by moving a node or group O select an Outgroup for the tree M Midpoint root the tree T Transpose immediate branches at a node F Flip (rotate) subtree at a node D Delete or restore nodes B Change or specify the length of a branch N Change or specify the name(s) of tip(s) H Move viewing window to the left J Move viewing window downward K Move viewing window upward L Move viewing window to the right C show only one Clade (subtree) (might be useful if tree is too big) ? Help (this screen) Q (Quit) Exit from program X Exit from program TO CONTINUE, PRESS ON THE Return OR Enter KEY ,----1:B ,-------------------8 ! `--2:C ! ! ,--------------------------------3:D --7-----9 ! ! ,------------------------------------4:E ! `-10 ! `------------------------------------5:F ! `-------------------------------------------------------------------------6:A NEXT? (R . = U W O M T F D B N H J K L C + ? X Q) (? for Help): M ,-----------------------------------------------------------------------6:A ! -11 ,-----1:B ! ,------------------------8 ! ! `---2:C `-----------------7 ! ,---------------------------------------3:D `-------9 ! ,--------------------------------------------4:E `-10 `--------------------------------------------5:F NEXT? (R . = U W O M T F D B N H J K L C + ? X Q) (? for Help): Q Do you want to write out the tree to a file? (Y or N): Y Enter R if the tree is to be rooted, OR enter U if the tree is to be unrooted: R Tree written to file "offsprings_out.treefile"