background white
script dna.def

select within(3.5, *.O?') and protein and (oxygen or nitrogen)
spacefill 120
color green
zoom 200
pause
zoom off
spacefill off
select all
color cpk
echo You can see image of protein and backbone sugar polar contact.


select within(4.5, *.C?') and protein and carbon
spacefill 200
color green
zoom 200
pause
zoom off
spacefill off
select all
color cpk
echo You can see image of protein and backbone sugar hydrophobic contact.


select within(3.5, *.OP?) and protein and (oxygen or nitrogen)

spacefill 120
color blue
zoom 200
pause
zoom off
spacefill off
select all
color cpk

echo You can see image of protein and phosphat group polar contact.




select within(4.5, *.P) and protein and carbon
spacefill 200
color blue
zoom 200
pause
zoom off
spacefill off
select all
color cpk

echo You can see image of protein and phosphat group hydrophobic contact.


select within(3.5, (oxygen,nitrogen) and mjg and base) and protein and (oxygen or nitrogen)
spacefill 120
color cyan
zoom 200
pause
zoom off
spacefill off
select all
color cpk
echo You can see image of protein and nitrogen group polar contact(mjg).


select within(4.5, carbon and mjg and base) and protein and carbon
spacefill 200
color cyan
zoom 200
pause
zoom off
spacefill off
select all
color cpk
echo You can see image of protein and nitrogen group hydrophobic contact(mjg).



select within(3.5, (oxygen,nitrogen) and mig and base) and protein and (oxygen or nitrogen)
spacefill 120
color black
zoom 200
pause
zoom off
spacefill off
select all
color cpk
echo You can see image of protein and nitrogen group polar contact(mig).


select within(4.5, carbon and mig and base) and protein and carbon
spacefill 200
color black
zoom 200
pause
zoom off
spacefill off
select all
color cpk
echo You can see image of protein and nitrogen group hydrophobic contact(mig).