BLASTN 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= U00096 U00096.2 Escherichia coli K12 MG1655, complete genome. (76 letters) Database: bs 21 sequences; 4,215,470 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value Z99124 Z99124 Bacillus subtilis complete genome (section 21 of 2... 38 9e-04 Z99119 Z99119 Bacillus subtilis complete genome (section 16 of 2... 38 9e-04 Z99106 Z99106 Bacillus subtilis complete genome (section 3 of 21... 38 9e-04 Z99104 Z99104 Bacillus subtilis complete genome (section 1 of 21... 38 9e-04 Z99108 Z99108 Bacillus subtilis complete genome (section 5 of 21... 32 0.053 Z99115 Z99115 Bacillus subtilis complete genome (section 12 of 2... 26 3.2 Z99111 Z99111 Bacillus subtilis complete genome (section 8 of 21... 26 3.2 >Z99124 Z99124 Bacillus subtilis complete genome (section 21 of 21): from 4010730 to 4214630. Length = 203901 Score = 38.2 bits (19), Expect = 9e-04 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tagctcagttggtagagca 26 ||||||||||||||||||| Sbjct: 143496 tagctcagttggtagagca 143478 Score = 38.2 bits (19), Expect = 9e-04 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tagctcagttggtagagca 26 ||||||||||||||||||| Sbjct: 143146 tagctcagttggtagagca 143128 >Z99119 Z99119 Bacillus subtilis complete genome (section 16 of 21): from 3013458 to 3213379. Length = 199922 Score = 38.2 bits (19), Expect = 9e-04 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tagctcagttggtagagca 26 ||||||||||||||||||| Sbjct: 159159 tagctcagttggtagagca 159141 Score = 38.2 bits (19), Expect = 9e-04 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tagctcagttggtagagca 26 ||||||||||||||||||| Sbjct: 158082 tagctcagttggtagagca 158064 Score = 32.2 bits (16), Expect = 0.053 Identities = 19/20 (95%) Strand = Plus / Minus Query: 45 ggtcgtaggttcgactccta 64 |||||||||||||| ||||| Sbjct: 158413 ggtcgtaggttcgagtccta 158394 Score = 30.2 bits (15), Expect = 0.21 Identities = 18/19 (94%) Strand = Plus / Minus Query: 8 tagctcagttggtagagca 26 ||||||| ||||||||||| Sbjct: 159272 tagctcaattggtagagca 159254 Score = 26.3 bits (13), Expect = 3.2 Identities = 13/13 (100%) Strand = Plus / Minus Query: 8 tagctcagttggt 20 ||||||||||||| Sbjct: 158451 tagctcagttggt 158439 Score = 26.3 bits (13), Expect = 3.2 Identities = 13/13 (100%) Strand = Plus / Plus Query: 23 agcagcgcattcg 35 ||||||||||||| Sbjct: 96055 agcagcgcattcg 96067 >Z99106 Z99106 Bacillus subtilis complete genome (section 3 of 21): from 415769 to 611680. Length = 195912 Score = 38.2 bits (19), Expect = 9e-04 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 tagctcagttggtagagca 26 ||||||||||||||||||| Sbjct: 112887 tagctcagttggtagagca 112905 >Z99104 Z99104 Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080. Length = 213080 Score = 38.2 bits (19), Expect = 9e-04 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 tagctcagttggtagagca 26 ||||||||||||||||||| Sbjct: 95571 tagctcagttggtagagca 95589 Score = 32.2 bits (16), Expect = 0.053 Identities = 19/20 (95%) Strand = Plus / Plus Query: 45 ggtcgtaggttcgactccta 64 |||||||||||||| ||||| Sbjct: 165796 ggtcgtaggttcgaatccta 165815 Score = 30.2 bits (15), Expect = 0.21 Identities = 18/19 (94%) Strand = Plus / Plus Query: 8 tagctcagttggtagagca 26 ||||||| ||||||||||| Sbjct: 194359 tagctcaattggtagagca 194377 Score = 30.2 bits (15), Expect = 0.21 Identities = 18/19 (94%) Strand = Plus / Plus Query: 8 tagctcagttggtagagca 26 ||||||| ||||||||||| Sbjct: 95459 tagctcaattggtagagca 95477 >Z99108 Z99108 Bacillus subtilis complete genome (section 5 of 21): from 813670 to 1011078. Length = 197409 Score = 32.2 bits (16), Expect = 0.053 Identities = 19/20 (95%) Strand = Plus / Plus Query: 45 ggtcgtaggttcgactccta 64 |||||||||||||| ||||| Sbjct: 137290 ggtcgtaggttcgaatccta 137309 Score = 30.2 bits (15), Expect = 0.21 Identities = 18/19 (94%) Strand = Plus / Plus Query: 8 tagctcagttggtagagca 26 |||||||||||||| |||| Sbjct: 137803 tagctcagttggtaaagca 137821 >Z99115 Z99115 Bacillus subtilis complete genome (section 12 of 21): from 2207806 to 2409180. Length = 201375 Score = 26.3 bits (13), Expect = 3.2 Identities = 13/13 (100%) Strand = Plus / Plus Query: 4 gatatagctcagt 16 ||||||||||||| Sbjct: 23952 gatatagctcagt 23964 >Z99111 Z99111 Bacillus subtilis complete genome (section 8 of 21): from 1410943 to 1602922. Length = 191980 Score = 26.3 bits (13), Expect = 3.2 Identities = 13/13 (100%) Strand = Plus / Minus Query: 26 agcgcattcgtaa 38 ||||||||||||| Sbjct: 83971 agcgcattcgtaa 83959 Database: bs Posted date: Nov 18, 2006 6:36 PM Number of letters in database: 4,215,470 Number of sequences in database: 21 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 107 Number of Sequences: 21 Number of extensions: 107 Number of successful extensions: 17 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of query: 76 length of database: 4,215,470 effective HSP length: 14 effective length of query: 62 effective length of database: 4,215,176 effective search space: 261340912 effective search space used: 261340912 T: 0 A: 0 X1: 11 (21.8 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 13 (26.3 bits)