TBLASTN 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|67465527|sp|P0A6Y5.1|HSLO_ECOLI RecName: Full=33 kDa chaperonin; AltName: Full=Heat shock protein 33; Short=HSP33 (292 letters) Database: xc 460 sequences; 5,103,728 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE012399 AE008922 |AE012399| Xanthomonas campestris pv. campestr... 136 3e-33 AE012107 AE008922 |AE012107| Xanthomonas campestris pv. campestr... 30 0.45 AE012515 AE008922 |AE012515| Xanthomonas campestris pv. campestr... 28 1.0 AE012512 AE008922 |AE012512| Xanthomonas campestris pv. campestr... 28 1.0 AE012483 AE008922 |AE012483| Xanthomonas campestris pv. campestr... 26 6.5 AE012516 AE008922 |AE012516| Xanthomonas campestris pv. campestr... 25 8.5 AE012190 AE008922 |AE012190| Xanthomonas campestris pv. campestr... 25 8.5 >AE012399 AE008922 |AE012399| Xanthomonas campestris pv. campestris str. ATCC 33913, section 307 of 460 of the complete genome. Length = 12752 Score = 136 bits (343), Expect = 3e-33 Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 5/292 (1%) Frame = +3 Query: 1 MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVXXXXXXXXXXXXXXXK 60 M HDQL R+L VRG V +++ + I YP + + K Sbjct: 7782 MTDHDQLSRFLLPAAGVRGVHVRLTQAWRDIQGAAHYPPFARQLLGEAAVASALFTGHTK 7961 Query: 61 FDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITIT-- 118 DG ++VQL+G+ + +RG+ ++ DL+ L + + ITI Sbjct: 7962 VDGRLSVQLRGNDRLRTLFAECTAAGTLRGIVQIADGADAPTDLRELGDDALLAITIENP 8141 Query: 119 ---PSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVM 175 P E +RYQ +VG++ LA E YF++SEQLPTRL + G A G+LLQ + Sbjct: 8142 GLDPREPQRYQSLVGMQAPDLAEAFETYFLQSEQLPTRLLLAAGP----DQAAGLLLQKL 8309 Query: 176 PAQNAQQDDFDHXXXXXXXXXXXXXXXXPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRE 235 P D + ++L RL+HEE + + + F C+CSRE Sbjct: 8310 PGDEGDTDGWTRVGALFDTLGAPELLSVAGEDLLHRLFHEEAPELVGNKALSFGCSCSRE 8489 Query: 236 RCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPA 287 R A L++L ++E + GE+++ C++CG Y F ++ + + A P+ Sbjct: 8490 RVAAMLQSLGEDEARAAAEPTGEVEVRCEFCGREYHFPLTELDVLFSEAQPS 8645 >AE012107 AE008922 |AE012107| Xanthomonas campestris pv. campestris str. ATCC 33913, section 15 of 460 of the complete genome. Length = 10029 Score = 29.6 bits (65), Expect = 0.45 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Frame = -2 Query: 71 GDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGY----VVITITPSEGERYQ 126 GD P+ + + +R V RV G+ E L G+GY + + P+ G Sbjct: 3464 GDAPLARGDVPAGHAGALRFVGRVVGDDGEAVLLWCGDGDGYLRGGLWVIEAPAHGVAGV 3285 Query: 127 GVVGLEGDTLAAC 139 G+V LEG AC Sbjct: 3284 GLVALEGHAAKAC 3246 >AE012515 AE008922 |AE012515| Xanthomonas campestris pv. campestris str. ATCC 33913, section 423 of 460 of the complete genome. Length = 10679 Score = 28.5 bits (62), Expect = 1.0 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = -1 Query: 224 QDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNN 283 +D + C CS A L+TL EVDS++ + D+ D AE+ + Sbjct: 6506 RDGDLICHCSPVSAAQVLRTLLWNEVDSVVMTSATLTGGGDFQSFAIDNGLPDHAEMASL 6327 Query: 284 ASPAD 288 ASP D Sbjct: 6326 ASPFD 6312 >AE012512 AE008922 |AE012512| Xanthomonas campestris pv. campestris str. ATCC 33913, section 420 of 460 of the complete genome. Length = 11141 Score = 28.5 bits (62), Expect = 1.0 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 7/113 (6%) Frame = +2 Query: 77 LAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTL 136 L ++ GN Q V+ IPE A LKTL V+T+ E G+ GL G L Sbjct: 3359 LLLLTGNTMAQA-----VRERIPELATLKTLGFQDRTVLTLVMVESVLLIGLGGLIGMGL 3523 Query: 137 AACL-------EDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQQ 182 +A + M ++ +P + ++ G A G+++ V+PA AQ+ Sbjct: 3524 SALVIPMVATRSGGLMPTQTVPLQTWLVG---LGLMAGIGIVVGVLPALRAQR 3673 >AE012483 AE008922 |AE012483| Xanthomonas campestris pv. campestris str. ATCC 33913, section 391 of 460 of the complete genome. Length = 12502 Score = 25.8 bits (55), Expect = 6.5 Identities = 13/41 (31%), Positives = 16/41 (39%) Frame = -2 Query: 232 CSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLF 272 C R CA A P I +HCD C +H+ F Sbjct: 2640 CVRRTCAGAYARAP-------------IPLHCDACTDHFRF 2557 >AE012516 AE008922 |AE012516| Xanthomonas campestris pv. campestris str. ATCC 33913, section 424 of 460 of the complete genome. Length = 10866 Score = 25.4 bits (54), Expect = 8.5 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +2 Query: 144 FMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQ 181 + R LP R RT VDG+P G + ++VMP A+ Sbjct: 2480 YTRPPGLPAR---RT--VDGRPPVGSISMRVMPCPGAR 2578 >AE012190 AE008922 |AE012190| Xanthomonas campestris pv. campestris str. ATCC 33913, section 98 of 460 of the complete genome. Length = 11410 Score = 25.4 bits (54), Expect = 8.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 158 TGDVDGKPAAGGMLLQVMPAQNAQ 181 TGD D GG+LL + AQ AQ Sbjct: 10487 TGDGDDIAGLGGVLLDALKAQEAQ 10558 Database: xc Posted date: Dec 28, 2008 9:40 AM Number of letters in database: 5,103,728 Number of sequences in database: 460 Lambda K H 0.317 0.136 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 460 Number of Hits to DB: 1,736,214 Number of extensions: 25120 Number of successful extensions: 125 Number of sequences better than 10.0: 7 Number of HSP's gapped: 122 Number of HSP's successfully gapped: 7 Length of query: 292 Length of database: 1,701,242 Length adjustment: 87 Effective length of query: 205 Effective length of database: 1,661,222 Effective search space: 340550510 Effective search space used: 340550510 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 45 (21.9 bits)