######################################## # Program: needle # Rundate: Wed Mar 29 2006 16:36:52 # Align_format: srspair # Report_file: 1to3_1_1_.needle ######################################## #======================================= # # Aligned_sequences: 2 # 1: GLMS_ECOLI # 2: Artificial # Matrix: EBLOSUM62 # Gap_penalty: 1.0 # Extend_penalty: 0.2 # # Length: 608 # Identity: 22/608 ( 3.6%) # Similarity: 24/608 ( 3.9%) # Gaps: 584/608 (96.1%) # Score: 96.0 # # #======================================= GLMS_ECOLI 1 CGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGK 50 Artificial 1 -------------------------------------------------- 0 GLMS_ECOLI 51 VQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGI 100 |||||||||||| Artificial 1 --------------------HTRWATHGEPSE------------------ 12 GLMS_ECOLI 101 IENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIP 150 :: | | | || Artificial 13 --------QD-K-R------------I---------------EA------ 19 GLMS_ECOLI 151 QLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVT 200 || | | Artificial 20 -------------------LA--------------E-----D-------- 23 GLMS_ECOLI 201 RRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRH 250 | Artificial 24 --F----------------------------------------------- 24 GLMS_ECOLI 251 YMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILAC 300 Artificial 25 -------------------------------------------------- 24 GLMS_ECOLI 301 GTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSG 350 Artificial 25 -------------------------------------------------- 24 GLMS_ECOLI 351 ETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVA 400 Artificial 25 -------------------------------------------------- 24 GLMS_ECOLI 401 STKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQ 450 Artificial 25 -------------------------------------------------- 24 GLMS_ECOLI 451 DKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAG 500 Artificial 25 -------------------------------------------------- 24 GLMS_ECOLI 501 ELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQD 550 Artificial 25 -------------------------------------------------- 24 GLMS_ECOLI 551 AGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRN 600 Artificial 25 -------------------------------------------------- 24 GLMS_ECOLI 601 LAKSVTVE 608 Artificial 25 -------- 24 #--------------------------------------- #---------------------------------------