load 2tra.pdb
define helix1 1-7,66-72
define helix2 49-53,61-65
define helix3 26-32,38-44
define helix4 8,10-14,22-25
define hel helix1,helix2,helix3,helix4
echo tRNA helices are defined as helix1,helix2,helix3,helix4
define loop1 54-60
define loop2 45-46,48
define loop3 33-37
define loop4 15-21
define loops loop1,loop2,loop3,loop4
echo tRNA loops are defined as loop1,loop2,loop3,loop4
define anticodon 34-36
echo tRNA anticodon as anticodon
define lend 73-76
echo tRNA lends are defined as lend
define knot1 5,68
define knot2 10,25
define knot3 17,55
define knot4 32,38
define knot5 30,40
define knot6 26,44
define knot7 13,22
define knots knot1,knot2,knot3,knot4,knot5,knot6,knot7
echo tRNA knots are defined as knot1,knot2,knot3,knot4,knot5,knot6,knot7
select helix1
wireframe 70
color green
echo Acceptor stem is in green!
select helix2
wireframe 70
color magenta
echo T-stem is in megenta!
select helix3
wireframe 70
color yellow
echo Anticodon stem is in yellow!
select helix4
wireframe 70
color purple
echo D-stem is in purple!
select anticodon
wireframe 70
color red
echo GUC anticodon is in red!
select knots
wireframe 70
color [33,70,248]
echo Non-canonical pairs are in blue!
echo Enjoy yourself!!!
echo Bye!
Генерируемое скриптом изображение
© Глотова Ирина,2005