######################################## # Program: needle # Rundate: Thu Mar 23 2006 19:16:27 # Align_format: srspair # Report_file: ecoli_human_2.needle ######################################## #======================================= # # Aligned_sequences: 2 # 1: SERA_ECOLI # 2: SERA_HUMAN # Matrix: EBLOSUM62 # Gap_penalty: 10.0 # Extend_penalty: 0.5 # # Length: 316 # Identity: 110/316 (34.8%) # Similarity: 161/316 (50.9%) # Gaps: 9/316 ( 2.8%) # Score: 448.0 # # #======================================= SERA_ECOLI 1 FLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSR 50 .|:.:.:.....:.|:..|...:| |..|..|:|...::|...:.:||. SERA_HUMAN 1 VLISDSLDPCCRKILQDGGLQVVE--KQNLSKEELIAELQDCEGLIVRSA 48 SERA_ECOLI 51 THLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNAPFSNTRSV 100 |.:|.|||||||||..:|....|.:.|||:||.::||.|.|.|..|:.|. SERA_HUMAN 49 TKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSA 98 SERA_ECOLI 101 AELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYGHI 150 |||..|.::.|.|.:|:|.|....|.|.:......|..||.|||:|.|.| SERA_HUMAN 99 AELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRI 148 SERA_ECOLI 151 GTQLGILAESLGMYVYFYD--IENKLPLGNATQVQHLSDLLNMSDVVSLH 198 |.::....:|.||....|| |..::......|...|.::..:.|.:::| SERA_HUMAN 149 GREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVH 198 SERA_ECOLI 199 VPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAG 248 .|..|||..::.....:..|.|..::|.:||.:||..||..||.|...|| SERA_HUMAN 199 TPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAG 248 SERA_ECOLI 249 AAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAG 298 ||:|||..|| |....|.:.:||:..||:|.||:|||...|.|:|. SERA_HUMAN 249 AALDVFTEEP-----PRDRALVDHENVISCPHLGASTKEAQSRCGEEIAV 293 SERA_ECOLI 299 KLIKYSDNGSTLSAVN 314 :.:......|....|| SERA_HUMAN 294 QFVDMVKGKSLTGVVN 309 #--------------------------------------- #---------------------------------------